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ARP/wARP Copyright 1998 by European Molecular Biology Laboratory Authors: Victor S. Lamzin and Anastassis Perrakis |
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Relevant literature:
- Hattne, J. & Lamzin, V.S. (2008) Patter recognition-based detection of planar objects in 3D electron density maps. Acta Cryst. D64, 834-842 Abstract
- Langer, G., Cohen, S.X., Lamzin, V.S. & Perrakis, A. (2008) Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7. Nature Protocols. 3, 1171-1179 Abstract
- Joosten, K., Cohen, S.X., Emsley, P., Mooij, W., Lamzin, V.S. & Perrakis, A. (2008) A knowledge-driven approach for crystallographic protein model completion. Acta Cryst. D64, 416-424 Abstract
- Cohen, S.X., Jelloul M.B., Long, F., Vagin, A., Knipscheer, P., Lebbink, J., Sixma, T.K., Lamzin, V.S., Murshudov, G.N. & Perrakis, A. (2008) ARP/wARP and molecular replacement: the next generation, Acta Cryst. D64, 49-60 Abstract
- Morris, R.J., Perrakis, A. & Lamzin, V.S. (2007) Getting a macromolecular model: model building, refinement, and validation. In Macromolecular Crystallography - conventional and high-throughput methods (Sanderson M.R. & Skelly J.V. eds.), pp. 155-172, Oxford University Press.
- Evrard, G.X., Langer, G.G., Perrakis, A. & Lamzin, V.S. (2007) Assessment of automatic ligand building in ARP/wARP. Acta Crystallogr. D63, 108-117 Abstract
- Zwart, P.H., Langer, G.G. & Lamzin, V.S. (2004) Modelling bound ligands in protein crystal structures. Acta Crystallogr. D60, 2230-2239 Abstract
- Cohen, S.X., Morris, R.J., Fernandez, F.J., Jelloul, M. Ben, Kakaris, M., Parthasarathy, V., Lamzin, V.S., Kleywegt, G.J. & Perrakis, A. (2004) Towards complete validated models in the next generation of ARP/wARP. Acta Crystallogr. D60, 2222-2229 Abstract
- Morris, R.J., Zwart, P.H., Cohen, S., Fernandez, F.J., Kakaris, M., Kirillova, O., Vonrhein, C., Perrakis, A. & Lamzin, V.S. (2004) Breaking good resolutions with ARP/wARP. J. Synchr. Rad. 11, 56-59 Abstract
- Morris, R.J., Perrakis, A. & Lamzin, V.S. (2003) ARP/wARP and automatic interpretation of protein electron density maps. In Meth. Enz. (Carter, C. & Sweet, B. eds.) 374, 229-244
- Morris, R.J., Perrakis, A. & Lamzin, V.S. (2002) ARP/wARP's model-building algorithms. I. The main chain. Acta Cryst. D58, 968-975 Abstract
- Perrakis, A., Harkiolaki, M., Wilson, K.S. & Lamzin, V.S. (2001) ARP/wARP and molecular replacement. Acta Cryst. D57, 1445-1450 Abstract
- Lamzin, V.S., Perrakis, A. & Wilson, K.S. (2001) The ARP/WARP suite for automated construction and refinement of protein models. In Int. Tables for Crystallography. Vol. F: Crystallography of biological macromolecules (Rossmann, M.G. & Arnold, E. eds.), Dordrecht, Kluwer Academic Publishers, The Netherlands, pp. 720-722
- Lamzin, V.S. & Perrakis, A. (2000) Current state of automated crystallographic data analysis. Nature Struct. Biol. 7, Structural Genomics Supplement, 978-981 Abstract
- Perrakis, A., Morris, R.M. & Lamzin, V.S. (1999) Automated protein model building combined with iterative structure refinement. Nature Struct. Biol. 6, 458-463 Abstract
- Perrakis, A., Sixma, T.K., Wilson K.S. & Lamzin, V.S. (1997) wARP: improvement and extension of crystallographic phases by weighted averaging of multiple refined dummy atomic models. Acta Cryst. D53, 448-455 Abstract
- Lamzin, V.S. & Wilson, K.S. (1997) Automated refinement for protein crystallography. In Meth. Enz. (Carter, C. & Sweet, B. eds.) 277, 269-305
- Lamzin, V.S. & Wilson, K.S. (1993) Automated refinement of protein models. Acta Cryst. D49, 129-147 Abstract
Pages on this server were created by Victor Lamzin and Anastassis Perrakis. VL and AP accept full responsibility for the content of these pages, for which EMBL is not responsible by any means.
Last Edited: Jun 4, 2010