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Staff at EMBL

CP-60003239

Dr. Victor Lamzin

Deputy Head of Outstation and Senior Scientist
Lamzin Group

EMBL Hamburg c/o DESY, Notkestraße 85, 22603 Hamburg, Germany

E-mail: send a mail

Biography

PhD 1987, Moscow State University.
Scientist, Inst. Biochemistry, Russian Academy of Sciences, Moscow, until 1991.
Postdoctoral research at EMBL Hamburg until 1995.
Staff scientist until 1997.
Group leader and Deputy Head of Outstation since 1997.

Publications

Total: 100 publication(s)

2014

Carolan CG, Lamzin VS. (2014)
Automated identification of crystallographic ligands using sparse-density representations.
Acta Crystallogr. D Biol. Crystallogr. 70(Pt 7):1844-1853. doi:10.1107/S1399004714008578
Europe PMC | doi

Petrova OA, Smekalova EM, Zvereva ME, Lamzin V, Dontsova OA. (2014)
Identification of additional telomerase component of the yeast H. polymorpha is a step towards understanding the complex at the atomic level.
Dokl. Biochem. Biophys. 455(1):59-64. doi:10.1134/s1607672914020057
Europe PMC | doi

Ponomarenko N, Chatziefthimiou SD, Kurkova I, Mokrushina Y, Mokrushina Y, Stepanova A, Smirnov I, Avakyan M, Bobik T, Mamedov A, Mitkevich V, Belogurov A Jr, Fedorova OS, Dubina M, Golovin A, Lamzin V, Friboulet A, Makarov AA, Wilmanns M, Gabibov A. (2014)
Role of κ→λ light-chain constant-domain switch in the structure and functionality of A17 reactibody
Acta Crystallogr. D Biol. Crystallogr. 70(Pt 3):708-719. doi:10.1107/s1399004713032446
Europe PMC | doi

Pereira J, Wiegels T, Lamzin V. (2014)
ValiFrag: are these proper folds? Evaluating fragment quality during automated protein model building

Pereira J, Wiegels T, Lamzin V. (2014)
On the Validation of Fragments During Automated Protein Model Building


2013

Langer GG, Hazledine S, Wiegels T, Carolan C, Lamzin VS. (2013)
Visual automated macromolecular model building
Acta Crystallogr. D Biol. Crystallogr. 69(Pt 4):635-641. doi:10.1107/s0907444913000565
Europe PMC | doi


2012

Mancuso AP, Groves MR, Polozhentsev OE, Williams GJ, McNulty I, Antony C, Santarella-Mellwig R, Soldatov AV, Lamzin V, Peele AG, Nugent KA, Vartanyants IA. (2012)
Internal structure of an intact Convallaria majalis pollen grain observed with X-ray Fresnel coherent diffractive imaging
Opt Express 20(24):26778-26785. doi:10.1364/oe.20.026778
Europe PMC | doi

Fedorova TV, Chulkin AM, Vavilova EA, Maisuradze IG, Trofimov AA, Zorov IN, Khotchenkov VP, Polyakov KM, Benevolensky SV, Koroleva OV, Lamzin VS. (2012)
Purification, biochemical characterization, and structure of recombinant endo-1,4-β-xylanase XylE
Biochemistry Mosc. 77(10):1190-1198. doi:10.1134/s0006297912100112
Europe PMC | doi

Langer GG, Evrard GX, Carolan CG, Lamzin VS. (2012)
Fragmentation-tree density representation for crystallographic modelling of bound ligands
J. Mol. Biol. 419(3-4):211-222. doi:10.1016/j.jmb.2012.03.012
Europe PMC | doi

Wiegels T, Lamzin VS. (2012)
Use of noncrystallographic symmetry for automated model building at medium to low resolution
Acta Crystallogr. D Biol. Crystallogr. 68(Pt 4):446-453. doi:10.1107/s0907444911050712
Europe PMC | doi

Wrenger C, Muller IB, Silber AM, Jordanova R, Lamzin VS, Groves MR. (2012)
Aspartate aminotransferase: bridging carbohydrate and energy metabolism in Plasmodium falciparum
Curr. Drug Metab. 13(3):332-336. doi:10.2174/138920012799320400
Europe PMC | doi

Urusova DV, Isupov MN, Antonyuk S, Kachalova GS, Obmolova G, Vagin AA, Lebedev AA, Burenkov GP, Dauter Z, Bartunik HD, Lamzin VS, Melik-Adamyan WR, Mueller TD, Schnackerz KD. (2012)
Crystal structure of D-serine dehydratase from Escherichia coli
Biochim. Biophys. Acta 1824(3):422-432. doi:10.1016/j.bbapap.2011.10.017
Europe PMC | doi

Lamzin VS, Perrakis A, Wilson KS. (2012)
ARP/wARP – automated model building and refinement
doi:10.1107/97809553602060000862
Europe PMC | doi


2011

Unge J, Mueller-Dieckmann C, Panjikar S, Tucker PA, Lamzin VS, Weiss MS. (2011)
On the routine use of soft X-rays in macromolecular crystallography. Part V. Molecular replacement and anomalous scattering
Acta Crystallogr. D Biol. Crystallogr. 67(Pt 8):729-738. doi:10.1107/s0907444911024887
Europe PMC | doi

Schmidt A, Teeter M, Weckert E, Lamzin VS. (2011)
Crystal structure of small protein crambin at 0.48 A resolution
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 67(Pt 4):424-428. doi:10.1107/s1744309110052607
Europe PMC | doi

Hattne J, Lamzin VS. (2011)
A moment invariant for evaluating the chirality of three-dimensional objects
J R Soc Interface 8(54):144-151. doi:10.1098/rsif.2010.0297
Europe PMC | doi


2010

Watts D, Müller-Dieckmann J, Tsakanova G, Lamzin VS, Groves MR. (2010)
Quantitive evaluation of macromolecular crystallization experiments using 1,8-ANS fluorescence
Acta Crystallogr. D Biol. Crystallogr. 66(Pt 8):901-908. doi:10.1107/s0907444910020664
Europe PMC | doi

Schmidt A, Lamzin VS. (2010)
Internal motion in protein crystal structures
Protein Sci. 19(5):944-953. doi:10.1002/pro.371
Europe PMC | doi


2009

Panjikar S, Parthasarathy V, Lamzin VS, Weiss MS, Tucker PA. (2009)
On the combination of molecular replacement and single-wavelength anomalous diffraction phasing for automated structure determination
Acta Crystallogr. D Biol. Crystallogr. 65(Pt 10):1089-1097. doi:10.1107/s0907444909029643
Europe PMC | doi

Heuser P, Langer GG, Lamzin VS. (2009)
Interpretation of very low resolution X-ray electron-density maps using core objects
Paper presented at the Workshop on New Algorithms in Macromolecular Crystallography and Electron Microscopy, Leiden, NETHERLANDS, MAY 12-18, 2008.Acta Crystallogr. D Biol. Crystallogr. 65(Pt 7):690-696. doi:10.1107/s090744490901991x
Europe PMC | doi

Polyakov KM, Boyko KM, Tikhonova TV, Slutsky A, Antipov AN, Zvyagilskaya RA, Popov AN, Bourenkov GP, Lamzin VS, Popov VO. (2009)
High-resolution structural analysis of a novel octaheme cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens
J. Mol. Biol. 389(5):846-862. doi:10.1016/j.jmb.2009.04.037
Europe PMC | doi

Polyakov KM, Fedorova TV, Stepanova EV, Cherkashin EA, Kurzeev SA, Strokopytov BV, Lamzin VS, Koroleva OV. (2009)
Structure of native laccase from Trametes hirsuta at 1.8 A resolution
Acta Crystallogr. D Biol. Crystallogr. 65(Pt 6):611-617. doi:10.1107/s0907444909011950
Europe PMC | doi

Jordanova R, Lamzin VS, Groves MR. (2009)
Crystal Identification and Classification
Nova Science Publishers, USA.Astrophysics and Condensed Matter 175-193.
Europe PMC


2008

Faust A, Panjikar S, Mueller U, Parthasarathy V, Schmidt A, Lamzin VS, Weiss MS. (2008)
A tutorial for learning and teaching macromolecular crystallography
J APPL CRYSTALLOGR 41:1161-1172. doi:10.1107/S0021889808032494
doi

Schmidt A, Gruber K, Kratky C, Lamzin VS. (2008)
Atomic resolution crystal structures and quantum chemistry meet to reveal subtleties of hydroxynitrile lyase catalysis
J. Biol. Chem. 283(31):21827-21836. doi:10.1074/jbc.m801056200
Europe PMC | doi

Hattne J, Lamzin VS. (2008)
Pattern-recognition-based detection of planar objects in three-dimensional electron-density maps
Acta Crystallogr. D Biol. Crystallogr. D64(Pt 8):834-842. doi:10.1107/s0907444908014327
Europe PMC | doi

Manicka S, Peleg Y, Unger T, Albeck S, Dym O, Greenblatt HM, Bourenkov G, Lamzin V, Krishnaswamy S, Sussman JL. (2008)
Crystal structure of YagE, a putative DHDPS-like protein from Escherichia coli K12
Proteins 71(4):2102-2108. doi:10.1002/prot.22023
Europe PMC | doi

Joosten K, Cohen SX, Emsley P, Mooij W, Lamzin VS, Perrakis A. (2008)
A knowledge-driven approach for crystallographic protein model completion
Acta Crystallogr. D Biol. Crystallogr. 64(Pt 4):416-424. doi:10.1107/s0907444908001558
Europe PMC | doi

Cohen SX, Ben Jelloul M, Long F, Vagin A, Knipscheer P, Lebbink J, Sixma TK, Lamzin VS, Murshudov GN, Perrakis A. (2008)
ARP/wARP and molecular replacement: the next generation
Acta Crystallogr. D Biol. Crystallogr. 64(Pt 1):49-60. doi:10.1107/s0907444907047580
Europe PMC | doi

Langer G, Cohen SX, Lamzin VS, Perrakis A. (2008)
Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7
Nat Protoc 3(7):1171-1179. doi:10.1038/nprot.2008.91
Europe PMC | doi


2007

Schmidt A, Lamzin VS. (2007)
From atoms to proteins
Cell. Mol. Life Sci. 64(15):1959-1969. doi:10.1007/s00018-007-7195-7
Europe PMC | doi

Schirwitz K, Schmidt A, Lamzin VS. (2007)
High-resolution structures of formate dehydrogenase from Candida boidinii
Protein Sci. 16(6):1146-1156. doi:10.1110/ps.062741707
Europe PMC | doi

Meijers R, Adolph HW, Dauter Z, Wilson KS, Lamzin VS, Cedergren-Zeppezauer ES. (2007)
Structural evidence for a ligand coordination switch in liver alcohol dehydrogenase
Biochemistry 46(18):5446-5454. doi:10.1021/bi6023594
Europe PMC | doi

Evrard GX, Langer GG, Perrakis A, Lamzin VS. (2007)
Assessment of automatic ligand building in ARP/wARP
Acta Crystallogr. D Biol. Crystallogr. 63(Pt 1):108-117. doi:10.1107/s0907444906023389
Europe PMC | doi


2006

Pothineni SB, Strutz T, Lamzin VS. (2006)
Automated detection and centring of cryocooled protein crystals
Acta Crystallogr. D Biol. Crystallogr. 62(Pt 11):1358-1368. doi:10.1107/s0907444906031672
Europe PMC | doi

Lyashenko AV, Bento I, Zaitsev VN, Zhukhlistova NE, Zhukova YN, Gabdoulkhakov AG, Morgunova EY, Voelter W, Kachalova GS, Stepanova EV, Koroleva OV, Lamzin VS, Tishkov VI, Betzel C, Lindley PF, Mikhailov AM. (2006)
X-ray structural studies of the fungal laccase from Cerrena maxima
J. Biol. Inorg. Chem. 11(8):963-973. doi:10.1007/s00775-006-0158-x
Europe PMC | doi

Lyashenko AV, Zhukhlistova NE, Gabdoulkhakov AG, Zhukova YN, Voelter W, Zaitsev VN, Bento I, Stepanova EV, Kachalova GS, Koroleva OV, Cherkashyn EA, Tishkov VI, Lamzin VS, Schirwitz K, Morgunova EY, Betzel C, Lindley PF, Mikhailov AM. (2006)
Purification, crystallization and preliminary X-ray study of the fungal laccase from Cerrena maxima
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 62(Pt 10):954-957.
Europe PMC

Bahar M, Ballard C, Cohen SX, Cowtan KD, Dodson EJ, Emsley P, Esnouf RM, Keegan R, Lamzin V, Langer G, Levdikov V, Long F, Meier C, Muller A, Murshudov GN, Perrakis A, Siebold C, Stein N, Turkenburg MG, Vagin AA, Winn M, Winter G, Wilson KS. (2006)
SPINE workshop on automated X-ray analysis: a progress report
Acta Crystallogr. D Biol. Crystallogr. 62(Pt 10):1170-1183. doi:10.1107/s0907444906032197
Europe PMC | doi

Kauffmann B, Weiss MS, Lamzin VS, Schmidt A. (2006)
How to avoid premature decay of your macromolecular crystal: a quick soak for long life
Structure 14(7):1099-1105. doi:10.1016/j.str.2006.05.015
Europe PMC | doi

Boyko KM, Polyakov KM, Tikhonova TV, Slutsky A, Antipov AN, Zvyagilskaya RA, Bourenkov GP, Popov AN, Lamzin VS, Popov VO. (2006)
Crystallization and preliminary X-ray analysis of cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 62(Pt 3):215-217.
Europe PMC

Urusova DV, Levdikov VM, Antonyuk SV, Grebenko AI, Lamzin VS, Melik-Adamyan VR. (2006)
X-ray diffraction study of the complex of the enzyme SAICAR synthase with the reaction product
Crystallography Reports 51(5):824-827.
Europe PMC


2005

Schmidt A, Lamzin VS. (2005)
Extraction of functional motion in trypsin crystal structures
Acta Crystallogr. D Biol. Crystallogr. 61(Pt 8):1132-1139. doi:10.1107/s0907444905016732
Europe PMC | doi

Panjikar S, Parthasarathy V, Lamzin VS, Weiss MS, Tucker PA. (2005)
Auto-rickshaw: an automated crystal structure determination platform as an efficient tool for the validation of an X-ray diffraction experiment
Acta Crystallogr. D Biol. Crystallogr. 61(Pt 4):449-457. doi:10.1107/s0907444905001307
Europe PMC | doi


2004

Zwart PH, Langer GG, Lamzin VS. (2004)
Modelling bound ligands in protein crystal structures
Acta Crystallogr. D Biol. Crystallogr. 60(Pt 12 Pt 1):2230-2239. doi:10.1107/s0907444904012995
Europe PMC | doi

Cohen SX, Morris RJ, Fernandez FJ, Ben Jelloul M, Kakaris M, Parthasarathy V, Lamzin VS, Kleywegt GJ, Perrakis A. (2004)
Towards complete validated models in the next generation of ARP/wARP
Acta Crystallogr. D Biol. Crystallogr. 60(Pt 12 Pt 1):2222-2229. doi:10.1107/s0907444904027556
Europe PMC | doi

Meijers R, Blagova EV, Levdikov VM, Rudenskaya GN, Chestukhina GG, Akimkina TV, Kostrov SV, Lamzin VS, Kuranova IP. (2004)
The crystal structure of glutamyl endopeptidase from Bacillus intermedius reveals a structural link between zymogen activation and charge compensation
Biochemistry 43(10):2784-2791. doi:10.1021/bi035354s
Europe PMC | doi

Zwart PH, Lamzin VS. (2004)
The influence of positional errors on the Debye effects
Acta Crystallogr. D Biol. Crystallogr. 60(Pt 2):220-226. doi:10.1107/s0907444903025526
Europe PMC | doi

Morris RJ, Zwart PH, Cohen S, Fernandez FJ, Kakaris M, Kirillova O, Vonrhein C, Perrakis A, Lamzin VS. (2004)
Breaking good resolutions with ARP/wARP
Paper presented at the International Symposium on Diffraction Structural Biology (ISDSB2003), TSUKUBA, JAPAN, MAY 28-JUN 02, 2003.J Synchrotron Radiat 11(Pt 1):56-59.
Europe PMC


2003

Zwart PH, Lamzin VS. (2003)
Distance distributions and electron-density characteristics of protein models
Acta Crystallogr. D Biol. Crystallogr. 59(Pt 12):2104-2113. doi:10.1107/s0907444903018596
Europe PMC | doi

Schmidt A, Jelsch C, Ostergaard P, Rypniewski W, Lamzin VS. (2003)
Trypsin revisited: crystallography AT (SUB) atomic resolution and quantum chemistry revealing details of catalysis
J. Biol. Chem. 278(44):43357-43362. doi:10.1074/jbc.m306944200
Europe PMC | doi

Pegasova TV, Zwart P, Koroleva OV, Stepanova EV, Rebrikov DV, Lamzin VS. (2003)
Crystallization and preliminary X-ray analysis of a four-copper laccase from Coriolus hirsutus
Acta Crystallogr. D Biol. Crystallogr. 59(Pt 8):1459-1461. doi:10.1107/s0907444903011521
Europe PMC | doi

Morris RJ, Perrakis A, Lamzin VS. (2003)
ARP/wARP and automatic interpretation of protein electron density maps
Meth. Enzymol. 374:229-244. doi:10.1016/s0076-6879(03)74011-7
Europe PMC | doi

Terwilliger TC, Park MS, Waldo GS, Berendzen J, Hung LW, Kim CY, Smith CV, Sacchettini JC, Bellinzoni M, Bossi R, De Rossi E, Mattevi A, Milano A, Riccardi G, Rizzi M, Roberts MM, Coker AR, Fossati G, Mascagni P, Coates AR, Wood SP, Goulding CW, Apostol MI, Anderson DH, Gill HS, Eisenberg DS, Taneja B, Mande S, Pohl E, Lamzin V, Tucker P, Wilmanns M, Colovos C, Meyer-Klaucke W, Munro AW, McLean KJ, Marshall KR, Leys D, Yang JK, Yoon HJ, Lee BI, Lee MG, Kwak JE, Han BW, Lee JY, Baek SH, Suh SW, Komen MM, Arcus VL, Baker EN, Lott JS, Jacobs W Jr, Alber T, Rupp B. (2003)
The TB structural genomics consortium: a resource for Mycobacterium tuberculosis biology
Tuberculosis (Edinb) 83(4):223-249. doi:10.1016/s1472-9792(03)00051-9
Europe PMC | doi


2002

Schmidt A, Lamzin VS. (2002)
Veni, vidi, vici - atomic resolution unravelling the mysteries of protein function
Curr. Opin. Struct. Biol. 12(6):698-703. doi:10.1016/s0959-440x(02)00394-9
Europe PMC | doi

Schmidt A, Gonzalez A, Morris RJ, Costabel M, Alzari PM, Lamzin VS. (2002)
Advantages of high-resolution phasing: MAD to atomic resolution
Acta Crystallogr. D Biol. Crystallogr. 58(Pt 9):1433-1441. doi:10.1107/s0907444902011368
Europe PMC | doi

Sevcík J, Lamzin VS, Dauter Z, Wilson KS. (2002)
Atomic resolution data reveal flexibility in the structure of RNase Sa
Acta Crystallogr. D Biol. Crystallogr. 58(Pt 8):1307-1313.
Europe PMC

Morris RJ, Perrakis A, Lamzin VS. (2002)
ARP/wARP's model-building algorithms. I. The main chain
Acta Crystallogr. D Biol. Crystallogr. 58(Pt 6 Pt 2):968-975. doi:10.1107/s0907444902005462
Europe PMC | doi

Razeto A, Kochhar S, Hottinger H, Dauter M, Wilson KS, Lamzin VS. (2002)
Domain closure, substrate specificity and catalysis of D-lactate dehydrogenase from Lactobacillus bulgaricus
J. Mol. Biol. 318(1):109-119. doi:10.1016/s0022-2836(02)00086-4
Europe PMC | doi

Guérin DM, Lascombe MB, Costabel M, Souchon H, Lamzin V, Béguin P, Alzari PM. (2002)
Atomic (0.94 A) resolution structure of an inverting glycosidase in complex with substrate
J. Mol. Biol. 316(5):1061-1069. doi:10.1006/jmbi.2001.5404
Europe PMC | doi

Berisio R, Sica F, Lamzin VS, Wilson KS, Zagari A, Mazzarella L. (2002)
Atomic resolution structures of ribonuclease A at six pH values
Acta Crystallogr. D Biol. Crystallogr. 58(Pt 3):441-450. doi:10.1107/s0907444901021758
Europe PMC | doi

Galkin AG, Kutsenko AS, Bajulina NP, Esipova NG, Lamzin VS, Mesentsev AV, Shelukho DV, Tikhonova TV, Tishkov VI, Ustinnikova TB, Popov VO. (2002)
Site-directed mutagenesis of the essential arginine of the formate dehydrogenase active centre
Biochim. Biophys. Acta 1594(1):136-149. doi:10.1016/s0167-4838(01)00297-7
Europe PMC | doi


2001

Samygina VR, Popov AN, Rodina EV, Vorobyeva NN, Lamzin VS, Polyakov KM, Kurilova SA, Nazarova TI, Avaeva SM. (2001)
The structures of Escherichia coli inorganic pyrophosphatase complexed with Ca(2+) or CaPP(i) at atomic resolution and their mechanistic implications
J. Mol. Biol. 314(3):633-645. doi:10.1006/jmbi.2001.5149
Europe PMC | doi

Perrakis A, Harkiolaki M, Wilson KS, Lamzin VS. (2001)
ARP/wARP and molecular replacement
Acta Crystallogr. D Biol. Crystallogr. 57(Pt 10):1445-1450. doi:10.1107/s0907444901014007
Europe PMC | doi

Barynin VV, Whittaker MM, Antonyuk SV, Lamzin VS, Harrison PM, Artymiuk PJ, Whittaker JW. (2001)
Crystal structure of manganese catalase from Lactobacillus plantarum
Structure 9(8):725-738. doi:10.1016/s0969-2126(01)00628-1
Europe PMC | doi

Tishchenko S, Nikulin A, Fomenkova N, Nevskaya N, Nikonov O, Dumas P, Moine H, Ehresmann B, Ehresmann C, Piendl W, Lamzin V, Garber M, Nikonov S. (2001)
Detailed analysis of RNA-protein interactions within the ribosomal protein S8-rRNA complex from the archaeon Methanococcus jannaschii
J. Mol. Biol. 311(2):311-324. doi:10.1006/jmbi.2001.4877
Europe PMC | doi

Makedonopoulou S, Yannakopoulou K, Mentzafos D, Lamzin V, Popov A, Mavridis IM. (2001)
Non-covalent interactions in the crystallization of the enantiomers of 1,7-dioxaspiro
Acta Crystallogr., B 57(Pt 3):399-409. doi:10.1107/s0108768101001963
Europe PMC | doi

Lamzin, VS; Perrakis, A.; Wilson, K.S. (2001)
The ARP/wARP suite for automated construction and refinement of protein models
International Tables for Crystallography 720-722.

Grabarse W, Mahlert F, Duin EC, Goubeaud M, Shima S, Thauer RK, Lamzin V, Ermler U. (2001)
On the mechanism of biological methane formation: structural evidence for conformational changes in methyl-coenzyme M reductase upon substrate binding
J. Mol. Biol. 309(1):315-330. doi:10.1006/jmbi.2001.4647
Europe PMC | doi

Meijers R, Morris RJ, Adolph HW, Merli A, Lamzin VS, Cedergren-Zeppezauer ES. (2001)
On the enzymatic activation of NADH
J. Biol. Chem. 276(12):9316-9321. doi:10.1074/jbc.m010870200
Europe PMC | doi

Sebastião MP, Lamzin V, Saraiva MJ, Damas AM. (2001)
Transthyretin stability as a key factor in amyloidogenesis: X-ray analysis at atomic resolution
J. Mol. Biol. 306(4):733-744. doi:10.1006/jmbi.2000.4415
Europe PMC | doi


2000

Lamzin VS, Perrakis A, Bricogne G, Jiang J, Swaminathan S, Sussman JL. (2000)
Apotheosis, not apocalypse: methods in protein crystallography
Acta Crystallogr. D Biol. Crystallogr. 56(Pt 11):1510-1511. doi:10.1107/s0907444900010751
Europe PMC | doi

Lamzin VS, Perrakis A. (2000)
Current state of automated crystallographic data analysis
Nat. Struct. Biol. 7 Suppl:978-981. doi:10.1038/80763
Europe PMC | doi

Adolph HW, Zwart P, Meijers R, Hubatsch I, Kiefer M, Lamzin V, Cedergren-Zeppezauer E. (2000)
Structural basis for substrate specificity differences of horse liver alcohol dehydrogenase isozymes
Biochemistry 39(42):12885-12897. doi:10.1021/bi001376s
Europe PMC | doi

Samygina VR, Antonyuk SV, Lamzin VS, Popov AN. (2000)
Improving the X-ray resolution by reversible flash-cooling combined with concentration screening, as exemplified with PPase
Acta Crystallogr. D Biol. Crystallogr. 56(Pt 5):595-603. doi:10.1107/s0907444900002493
Europe PMC | doi

Jelsch C, Teeter MM, Lamzin V, Pichon-Pesme V, Blessing RH, Lecomte C. (2000)
Accurate protein crystallography at ultra-high resolution: valence electron distribution in crambin
Proc. Natl. Acad. Sci. U.S.A. 97(7):3171-3176. doi:10.1073/pnas.97.7.3171
Europe PMC | doi

Kochhar S, Lamzin VS, Razeto A, Delley M, Hottinger H, Germond JE. (2000)
Roles of his205, his296, his303 and Asp259 in catalysis by NAD+-specific D-lactate dehydrogenase
Eur. J. Biochem. 267(6):1633-1639. doi:10.1046/j.1432-1327.2000.01155.x
Europe PMC | doi

Antonyuk SV, Melik-Adamyan VR, Popov AN, Lamzin VS, Hempstead PD, Harrison PM, Artymyuk PJ, Barynin VV. (2000)
Three-dimensional structure of the enzyme dimanganese catalase from Thermus thermophilus at 1 angstrom resolution
Crystallography Reports 45(1):105-116.
Europe PMC


1999

Parisini E, Capozzi F, Lubini P, Lamzin V, Luchinat C, Sheldrick GM. (1999)
Ab initio solution and refinement of two high-potential iron protein structures at atomic resolution
Acta Crystallogr. D Biol. Crystallogr. 55(Pt 11):1773-1784. doi:10.1107/s0907444999009129
Europe PMC | doi

Declercq JP, Evrard C, Lamzin V, Parello J. (1999)
Crystal structure of the EF-hand parvalbumin at atomic resolution (0.91 A) and at low temperature (100 K). Evidence for conformational multistates within the hydrophobic core
Protein Sci. 8(10):2194-2204.
Europe PMC

Berisio R, Lamzin VS, Sica F, Wilson KS, Zagari A, Mazzarella L. (1999)
Protein titration in the crystal state
J. Mol. Biol. 292(4):845-854. doi:10.1006/jmbi.1999.3093
Europe PMC | doi

Lamzin VS, Morris RJ, Dauter Z, Wilson KS, Teeter MM. (1999)
Experimental observation of bonding electrons in proteins
J. Biol. Chem. 274(30):20753-20755. doi:10.1074/jbc.274.30.20753
Europe PMC | doi

Perrakis A, Morris R, Lamzin VS. (1999)
Automated protein model building combined with iterative structure refinement
Nat. Struct. Biol. 6(5):458-463. doi:10.1038/8263
Europe PMC | doi

Frazão C, Sieker L, Sheldrick G, Lamzin V, LeGall J, Carrondo MA. (1999)
Ab initio structure solution of a dimeric cytochrome c3 from Desulfovibrio gigas containing disulfide bridges
J. Biol. Inorg. Chem. 4(2):162-165. doi:10.1007/s007750050299
Europe PMC | doi

Perrakis A, Antoniadou-Vyza E, Tsitsa P, Lamzin VS, Wilson KS, Hamodrakas SJ. (1999)
Molecular, crystal and solution structure of a beta-cyclodextrin complex with the bromide salt of 2-(3-dimethylaminopropyl)tricyclo[3.3.1.1(3,7)]decan-2-ol, a potent antimicrobial drug
Carbohydr. Res. 317(1-4):19-28. doi:10.1016/s0008-6215(99)00021-x
Europe PMC | doi


1998

Walsh MA, Schneider TR, Sieker LC, Dauter Z, Lamzin VS, Wilson KS. (1998)
Refinement of triclinic hen egg-white lysozyme at atomic resolution
Acta Crystallogr. D Biol. Crystallogr. 54(Pt 4):522-546. doi:10.1107/s0907444997013656
Europe PMC | doi

Dodson EJ, Davies GJ, Lamzin VS, Murshudov GN, Wilson KS. (1998)
Validation tools: can they indicate the information content of macromolecular crystal structures?
Structure 6(6):685-690. doi:10.1016/s0969-2126(98)00070-7
Europe PMC | doi

Esposito L, Sica F, Sorrentino G, Berisio R, Carotenuto L, Giordano A, Raia CA, Rossi M, Lamzin VS, Wilson KS, Zagari A. (1998)
Protein crystal growth in the Advanced Protein Crystallization Facility on the LMS mission: a comparison of Sulfolobus solfataricus alcohol dehydrogenase crystals grown on the ground and in microgravity
Acta Crystallogr. D Biol. Crystallogr. 54(Pt 3):386-390. doi:10.1107/s0907444997011992
Europe PMC | doi

Levdikov VM, Barynin VV, Grebenko AI, Melik-Adamyan WR, Lamzin VS, Wilson KS. (1998)
The structure of SAICAR synthase: an enzyme in the de novo pathway of purine nucleotide biosynthesis
Structure 6(3):363-376. doi:10.1016/s0969-2126(98)00038-0
Europe PMC | doi

Kutzenko AS, Lamzin VS, Popov VO. (1998)
Conserved supersecondary structural motif in NAD-dependent dehydrogenases
FEBS Lett. 423(1):105-109. doi:10.1016/s0014-5793(98)00074-x
Europe PMC | doi

EU 3-D Validation Network. (1998)
Who checks the checkers? Four validation tools applied to eight atomic resolution structures. EU 3-D Validation Network
J. Mol. Biol. 276(2):417-436.
Europe PMC

Van Asselt EJ, Perrakis A, Kalk KH, Lamzin VS, Dijkstra BW. (1998)
Accelerated X-ray structure elucidation of a 36 kDa muramidase/transglycosylase using wARP
Acta Crystallogr. D Biol. Crystallogr. 54(Pt 1):58-73. doi:10.1107/s0907444997010330
Europe PMC | doi


1997

Mathieu M, Modis Y, Zeelen JP, Engel CK, Abagyan RA, Ahlberg A, Rasmussen B, Lamzin VS, Kunau WH, Wierenga RK. (1997)
The 1.8 A crystal structure of the dimeric peroxisomal 3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: implications for substrate binding and reaction mechanism
J. Mol. Biol. 273(3):714-728. doi:10.1006/jmbi.1997.1331
Europe PMC | doi

Dauter Z, Lamzin VS, Wilson KS. (1997)
The benefits of atomic resolution
Curr. Opin. Struct. Biol. 7(5):681-688. doi:10.1016/s0959-440x(97)80078-4
Europe PMC | doi

Perrakis A, Sixma TK, Wilson KS, Lamzin VS. (1997)
wARP: improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models
Acta Crystallogr. D Biol. Crystallogr. 53(Pt 4):448-455. doi:10.1107/s0907444997005696
Europe PMC | doi

Longhi S, Czjzek M, Lamzin V, Nicolas A, Cambillau C. (1997)
Atomic resolution (1.0 A) crystal structure of Fusarium solani cutinase: stereochemical analysis
J. Mol. Biol. 268(4):779-799. doi:10.1006/jmbi.1997.1000
Europe PMC | doi

Lamzin VS, Wilson KS. (1997)
Automated refinement for protein crystallography
Meth. Enzymol. 277:269-305.
Europe PMC


1996

Damas AM, Ribeiro S, Lamzin VS, Palha JA, Saraiva MJ. (1996)
Structure of the Val122Ile variant transthyretin - a cardiomyopathic mutant
Acta Crystallogr. D Biol. Crystallogr. 52(Pt 5):966-972. doi:10.1107/s0907444996003307
Europe PMC | doi

Harutyunyan EH, Kuranova IP, Vainshtein BK, Höhne WE, Lamzin VS, Dauter Z, Teplyakov AV, Wilson KS. (1996)
X-ray structure of yeast inorganic pyrophosphatase complexed with manganese and phosphate
Eur. J. Biochem. 239(1):220-228. doi:10.1111/j.1432-1033.1996.0220u.x
Europe PMC | doi

Pignol D, Gaboriaud C, Fontecilla-Camps JC, Lamzin VS, Wilson KS. (1996)
How to escape from model bias with a high-resolution native data set - structure determination of the PcpA-S6 subunit III
Acta Crystallogr. D Biol. Crystallogr. 52(Pt 2):345-355. doi:10.1107/s0907444995009528
Europe PMC | doi


1994

Tegoni M, Silvestrini MC, Lamzin VS, Brunori M, Cambillau C. (1994)
Crystallization and preliminary X-ray analysis of a new crystal form of nitrite reductase from Pseudomonas aeruginosa
J. Mol. Biol. 243(2):347-350. doi:10.1006/jmbi.1994.1659
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