EMBO Conference Series
Catalytic mechanisms by biological systems: at the interface between chemistry and biology
EMBL Hamburg, Germany Wednesday 5 May - Friday 7 May 2010
Programme
Wednesday 5th May |
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12:00 - 14:00 |
Arrival / Registration and Lunch |
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14:00 |
Welcome |
Victor Lamzin |
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14:15 - 16:30 |
Session 1. Catalysis at the Cellular Level |
Chair: Stephen Benkovic |
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14:15 - 14:50 |
Tomitake Tsukihara - Structure of the Gap Junction Channel and its Implications on its Biological Functions |
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14:50 - 15:25 |
Steve Ealick - Structural and Mechanistic Studies on Two Unpredicted Radical SAM Enzymes |
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15:25 - 16:00 |
Daniel Amador Naguez - Metabolomic Data Reveals Pathways and Regulatory Principles in C. acetobutylicum |
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16:00 - 16:20 |
Poster Talk: Sarah Wilkins - Characterisation of Substrate Specificity of the Oxygen-Dependent Asparaginyl Hydroxylase FIH-1 |
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16:20 - 17:00 |
Coffee / Posters |
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17:00 - 18:30 |
Session 2. New Biocatalysts |
Chair: Rik Wierenga |
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17:00 - 17:35 |
Chi-Huey Wong - Post-translational Glycosylation: Challenges and Opportunities |
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17:35 - 18:10 |
Marco Fraaije - New Mechanistic Insights into Oxidative Flavoenzymes |
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18:10 - 18:30 |
Poster talk: Evangelia Kapetaniou - Engineering New Enzymatic Activities into TIM-Barrel Framework |
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18:30 - 19:30 |
Poster session |
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Thursday 6th May |
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8:30 - 9:00 |
Morning coffee |
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9:00 - 11:05 |
Session 3. Advanced Crystallographic Approaches |
Chair: Andrea Schmidt |
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9:00 - 9:35 |
John Helliwell - The Determination of Protonation States in Proteins |
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9:35 - 10:10 |
Dominique Bourgouis - Combining Spectroscopy and Crystallography: a tool to investigate GFP fluorescence |
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10:10 - 10:45 |
Ilme Schlichting - When Flavins get the Blues — On Blue-Light Photoreceptor Signaling |
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10:45 - 11:05 |
Poster Talk: Michele Cianci - Crystallographic Analysis of Counter-Ion Effects on Subtilisin Enzymatic Action in Acetonitrile |
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11:05 - 11:30 |
Coffee Break |
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11:30 - 13:00 |
Session 4. Molecular Medicine |
Chair: Reinhard Sterner |
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11:30 - 12:05 |
Kathleen Aertgeerts - Structure-Based Drug Design: Increasing the likelihood to create new medicines |
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12:05 - 12:40 |
Rebecca Wade |
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12:40 - 14:30 |
Lunch / Posters |
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14:30 - 15:45 |
Session 5. Spectrometry and Single Molecule Techniques |
Chair: Anne-Marie Lambeir |
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14:30 - 15:05 |
Henry Chapman - Nanocrystallography with X-ray Free-Electron Lasers |
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15:05 - 15:40 |
Ari Gafni - Single Molecule Fluorescence Studies of Amyloid Beta Pore Formation and Cell Toxicity |
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15:40 - 16:15 |
Jens Andersen - Modern Mass Spectrometry Approaches for Studying Proteins in vivo and in vitro |
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16:15 - 16:35 |
Poster Talk: Georg Willie - Looking at Enzymes in the Infrared |
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16:35 - 17:00 |
Coffee |
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17:00 - 19:00 |
Session 6. Data Mining |
Chair: Victor Lamzin |
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17:00 - 17:35 |
Janet Thornton -The Evolution of Enzyme Mechanisms and Functional Diversity |
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17:35 - 18:10 |
Dietmar Schomburg - From Metabolism to Systems Biology |
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18:10 - 18:45 |
Richard Morris - Structural Bioinformatics and Catalysis |
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18:45 - 19:45 |
Poster Session |
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20:00 |
Conference Dinner |
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Friday 7th May |
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9:30 - 10:00 |
Morning coffee |
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10:00 - 12:40 |
Session 7. Biocomputing Approaches |
Chair: Richard Morris |
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10:00 - 10:35 |
Michael Sutcliffe - Dynamically-Coupled Enzyme Catalysis: Insight from Simulation |
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10:35 - 11:10 |
Stephen Benkovic - The Importance of the Intrinsic Dynamic Properties of Enzymes |
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11:10 - 11:45 |
Gerrit Groenhof - Computer Simulations of Photobiological Processes: the Effect of the Protein Environment |
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11:45 - 12:05 |
Poster Talk: Julia Fischer - The Structures and Physicochemical Properties of Cofactors in Biocatalysis |
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12:05 - 12:25 |
Poster Talk: Ramon Crehuet - Can we Include Protein Flexibility when Computing Reaction Mechanisms? |
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12:25 - 14:00 |
Lunch |
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14:00 - 16:00 |
Session 8. Enzyme Reaction Mechanisms |
Chair: Andrea Mattevi |
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14:00 - 14:35 |
Perry Frey - Strong hydrogen bonding in enzymatic catalysis: The case for an LBHB in reactions of serine proteases |
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14:35 - 15:10 |
John Gerlt - Discovery and Prediction of Functions in the Enolase Superfamily |
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15:10 - 15:45 |
Dale Poulter - The Mechanism for Double Bond Isomerization in the Isoprenoid Biosynthetic Pathway |
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15:45 - 16:05 |
Poster Talk: Judit Toth: Pi-pi interaction between nucleobase and enzyme promotes phosphate ester hydrolysis in dUTPase |
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16:05 - 16:30 |
Discussion / Closing Remarks |
Victor Lamzin & Andrea Mattevi |
