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   16 September
 
   15 September
 
   PDB Exhibition
 
3D Domain swapping in cystatin C - implications for amyloidogenesis
Human cystatin C (HCC) is a physiological monomeric inhibitor of cysteine proteases. Aggregation of HCC, particularly of its L68Q natural variant, leads to amyloid formation in the brain arteries, and to death. The protein extracted from the amyloid fibrils is truncated at the N-terminus. HCC was the first amyloidogenic protein for which aggregation via 3D domain swapping was demonstrated by X-ray crystallography. The exchange of domains occurs after partial unfolding of the protein chains and leads to two-fold symmetric dimers. The monomeric fold of HCC consists of an extended beta sheet and of a long alpha helix (a) which links strands b1 and b2. The domain that is exchanged in the swapping act consists of the b1-a-b2 segment. Recently, we have demonstrated that N-truncated cystatin C forms very similar dimers using the same mechanism of domain swapping. The N-terminal sequence, which precedes strand b1, has no influence of the domain swapping process. Using the crystal structure of HCC as a template, we have modified the sequences of both the wt and L68Q HCC by introducing specific cysteine mutations designed to create disulfide bridges that would prevent the separation of domains by crosslinking them. The engineered proteins are indeed stabilized by the desired S-S bonds while retaining their full potential as protease inhibitors. Their tendency to dimerize is completely abolished and their capacity to form amyloid fibrils under drastic experimental conditions is greatly reduced.