Links
EMBL Software
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EMBL
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EMBL
Official EMBL Webpage, with links to all groups, research topics, outstations etc.
http://www.embl.org
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EMBL-Hamburg
Official Webpage of the EMBL Outstation in Hamburg, with links to all groups, research topics etc.
http://www.embl-hamburg.de
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Group Page
Webpage of the Lamzin Group within the official EMBL Hamburg webpage
http://www.embl-hamburg.de/research/unit/lamzin/index.html
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Software
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ARP/wARP
Main Page for the ARP/wARP project, including downloads, license agreement, literature etc.
http://www.arp-warp.org
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ARP/wARP Online Submission Interface
Interface for the online submission of ARP/wARP. All informations necessary can be put in this form and the computations are run on the EMBL-Hamburg cluster
http://cluster.embl-hamburg.de/ARPwARP/remote-http.html
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Autorickshaw
The EMBL-Hamburg automated crystal structure determination platform is a system which contains several distinct decision-makers which utilize a number of macromolecular crystallographic software programs to produce a software pipeline for automated and efficient crystal structure determination. A large number of possible structure solution paths are encoded in the system and the optimal path is selected by the decision-makers as the structure solution evolves. The processes have been optimised for speed so that the pipeline can be used effectively for validating the X-ray experiment at a synchrotron beamline. Currently, the platform offers SAD, SIRAS, 2W-MAD, 3W-MAD or 4W-MAD phase determination, molecular replacement (MR) and MRSAD phasing. Recently it has been extended to include RIP and MRRIP phasing.
http://www.embl-hamburg.de/Auto-Rickshaw/
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XREC
Main Page for the XREC project. XREC is a software suite for automated crystal recognition. Currently the software is applicable for automated centring of crystal on a beamline goniostat. XREC processes a series of images, which display different orientations of a crystal flash-cooled in a loop, determines the crystal centre and provides the estimate of accuracy of the results in terms of their 'reliability'. Please refer to the XREC Manual for details. The functionality of the software is being extended for automated scoring of crystallisation conditions.
http://www.embl-hamburg.de/XREC/
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BEST
BEST is a program for optimal planning of X-ray data collection from protein crystals by Gleb Bourenkov.
http://www.embl-hamburg.de/BEST/
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