Assembline

Assembline is an assembly line of macromolecular assemblies!

Assembline is a multi-step protocol for integrative structural modeling of macromolecular complexes based on electron microscopy, cross-linking mass spectrometry and other data. The protocols is based on our Xlink Analyzer and external software: Integrative Modeling Plafform (IMP), Python Modeling Interface (PMI), UCSF Chimera, and imp-sampcon. Comparing to other methods, Assembline enables efficient sampling of conformational space through a multi-step procedure, provides new modeling restraints, and includes a unique configuration system for setting up the modelling project.

Assembline showcase

Code

Tutorials

How to cite

If you use this software, please cite it along the dependencies it uses internally, at least:

Contact:

Please do not hesitate to send requests, comments and bug reports to:
Jan Kosinski, jan.kosinski@embl.de